Microarrays and Fees

Illumina Infinium BeadChip Arrays

Human Genotyping and Methylation Arrays- Reaction chemistry to prepare sample for hybridization, hybridization, scan and the array

Beadchip

Price/Sample

Array Format(Samples/ Slide)

Markers Per Sample

Custom Marker Add-On

Data Set Used for Content Selection

Content Description

Methylation EPIC

$460

$560 (low quality or FFPE)

8 >850K N/A  

Comprehensive Genome-Wide Coverage:

  • CpG sites outside of CpG islands
  • Non-CpG methylated sites identified in human stem cells (CHH sites)
  • Differentially methylated sites identified in tumor versus normal
  • FANTOM5 enhancers
  • ENCODE open chromatin and enhancers
  • DNase hypersensitive sites
  • miRNA promoter regions
  • > 90% of content contained on the Illumina HumanMethylation450K BeadChip
HumanOmni5-Quad $373 4 4.3M 500K 1000 Genomes Dec 2012 release / (MAF ≥ 1%)  Access the highest value content, plus 500K of your own.
HumanOmni5Exome $378 4 ~4.5M 200K 1000 Genomes Dec 2012 release/ (MAF ≥ 1%), plus exome content selected from 12,000 individual exome sequences taken from various large sequence projects The most powerful microarray. 4.3 million whole-genome variants down to 1% MAF, combined with novel functional exonic variants taken from over 12,000 sequenced exomes.
HumanOmni2.5-8 $272 8 ~2.5M 200K 1000 Genomes Project Pilot (MAF ≥ 2.5%) Common and rare variants targeting down to 2.5% MAF selected from the 1000 Genomes Project
HumanOmni2.5Exome-8 $277 8 ~2.6M N/A 1000 Genomes Project Pilot (MAF > 2.5%), plus exome content selected from 12,000 individual exome sequences taken from various large sequence projects Comprehensive coverage and functional exonic content for next generation genotyping, GWAS, and CNV analysis.
HumanOmniExpress-24 $144 24 >715K 50K HapMap MAF ≥ 5% Scan thousands of samples per week using optimized common tag SNPs.
HumanOmniExpressExome $209 8 >900K 30K HapMap MAF ≥ 5%, plus exome content selected from 12,000 individual exome sequences taken from various large sequence projects Scan thousands of samples per week using optimized common tag SNPs and novel functional exonic variants taken from over 12,000 sequenced exomes.
HumanCore-24 $99 24 >300K 300K   The customizable HumanCore-24 BeadChip offers the most economical way to perform and support large genetic studies. Developed in collaboration with several leading research institutions, the HumanCore-24 BeadChip contains highly-informative genome-wide tag SNPs found across diverse world populations, additional high-value markers (including indels and updated exome-focused content), and has capacity to include up to 300,000 semi-custom markers.
HumanExome-12 v1.2 $147 12 >240K 20K   Illumina Human Exome BeadChips deliver unparalleled coverage of putative functional exonic variants selected from over 12,000 individual exome and whole-genome sequences. Markers were identified through a close collaboration with leading geneticists with the goal of developing an extensive catalog of exome variants. The exonic content consists of > 250,000 markers representing diverse populations—including European, African, Chinese, and Hispanic individuals—and a range of common conditions, such as type 2 diabetes, cancer, metabolic, and psychiatric disorders.
HumanCoreExome-24 $104 24 >550K 100K   The customizable Infinium CoreExome-24 BeadChip offers the most economical way to perform and support large genetic studies, especially large-scale genotyping studies. They can also be used to quickly and easily obtain baseline sample data sets for a variety of downstream applications, including common variant, sex confirmation, mtDNA, ancestry, loss-of-variant, indel, and CNV studies.
Multi-Ethnic Global-8 $219 8 >1.7M 245K   The Infinium Multi-Ethnic Global-8 Kit provides a true multi-purpose, multi-ethnic genotyping array. With > 1.7 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight across diverse populations to epidemiologists, health care researchers, population geneticists, and genomic researchers.
Multi-Ethnic EUR/EAS/SAS-8 $209 8 >1.4M 245K   The Infinium Multi-Ethnic EUR/EAS/SAS-8 Kit provides a multi-purpose, multi-ethnic genotyping array focused on European, East Asian, and South Asian populations. With > 1.4 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight to epidemiologists, health care researchers, population geneticists, and genomic researchers.
Multi-Ethnic AMR/AFR-8 $209 8 >1.4M 245K   The Infinium Multi-Ethnic AMR/AFR-8 Kit provides a multi-purpose, multi-ethnic genotyping array focused on Hispanic and African American populations. With > 1.4 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight to epidemiologists, health care researchers, population geneticists, and genomic researchers.
ImmunoArray-24 v2 $93 24 >250K 390K   The Infinium ImmunoArray-24 v2 BeadChip is the next-generation genotyping array for detecting genetic variation in the human immune system. This BeadChip includes the most valuable content from the HumanImmuno v1 BeadChip, supplemented with newly selected content produced by the immunology research community. This new content includes the majority of the loci currently published in the GWAS catalog for major autoimmune and inflammatory disorders as well as published ancestry informative markers.
OncoArray-500K $115 24 >500K 120K   Infinium OncoArray-500K BeadChip is the most comprehensive, highest-density BeadChip available for researching cancer predisposition and risk. The OncoArray contains 500,000 SNPs with a genome-wide backbone of 250,000 tag SNPs. Additional SNPs include genetic variants associated with breast, colorectal, lung, ovarian, and prostate cancers plus SNPs covering ancestry, quantitative traits, pharmacogenetics, and fine-mapping of common cancer susceptibility loci. To support additional research requirements, the OncoArray can be tailored to incorporate up to 120,000 custom beadtypes.
PsychArray-24 $115 24 >500K 60K   Content for the Infinium PsychArray-24 includes 265,000 proven tag SNPs found on the Infinium HumanCore-24 BeadChip, 245,000 markers from the Infinium Exome-24 BeadChip, and 50,000 additional markers associated with common psychiatric disorders. These additional SNPs include genetic variants associated with the research of common psychiatric conditions such as schizophrenia, bipolar disorder, autism spectrum disorders, attention deficit hyperactivity disorder, major depressive disorder, obsessive compulsive disorder, anorexia, and Tourette’s syndrome.

Please contact Dr. Kevin Knudtson for pricing of arrays not listed above.

 


Contact Information

116 EMRB
Phone: (319) 335-7928