Allen TJ, Henze Bancroft LC, Unal O, Estkowski LD, Cashen TA, Korosec F, Strigel RM, Kelcz F, Fowler AM, Gegios A, Thai J, Lebel RM, Holmes JH. Evaluation of a Deep Learning Reconstruction for High-Quality T2-Weighted Breast Magnetic Resonance Imaging. Tomography. 2023 Oct 18;9(5):1949-1964. doi: 10.3390/tomography9050152. PMID: 37888744; PMCID: PMC10611328.

Allen TJ, Henze Bancroft LC, Wang K, Wang PN, Unal O, Estkowski LD, Cashen TA, Bayram E, Strigel RM, Holmes JH. Automated Placement of Scan and Pre-Scan Volumes for Breast MRI Using a Convolutional Neural Network. Tomography. 2023 May 10;9(3):967-980. doi: 10.3390/tomography9030079. PMID: 37218939; PMCID: PMC10204486.

Wang PN, Velikina JV, Bancroft LCH, Samsonov AA, Kelcz F, Strigel RM, Holmes JH. The Influence of Data-Driven Compressed Sensing Reconstruction on Quantitative Pharmacokinetic Analysis in Breast DCE MRI. Tomography. 2022 Jun 14;8(3):1552-1569. doi: 10.3390/tomography8030128. PMID: 35736876; PMCID: PMC9227412.

Bednarz BP, Jupitz S, Lee W, Mills D, Chan H, Fiorillo T, Sabitini J, Shoudy D, Patel A, Mitra J, Sarcar S, Wang B, Shepard A, Matrosic C, Holmes J, Culberson W, Bassetti M, Hill P, McMillan A, Zagzebski J, Smith LS, Foo TK. First-in-human imaging using a MR-compatible e4D ultrasound probe for motion management of radiotherapy. Phys Med. 2021 Aug;88:104-110. doi: 10.1016/j.ejmp.2021.06.017. Epub 2021 Jul 1. PMID: 34218199; PMCID: PMC8403156.

Holmes JH, Jen ML, Eisenmenger LB, Schubert T, Turski PA, Johnson KM. Spatial dependency and the role of local susceptibility for velocity selective arterial spin labeling (VS-ASL) relative tagging efficiency using accelerated 3D radial sampling with a BIR-8 preparation. Magn Reson Med. 2021 Jul;86(1):293-307. doi: 10.1002/mrm.28726. Epub 2021 Feb 21. PMID: 33615527.

Wang PN, Velikina JV, Strigel RM, Henze Bancroft LC, Samsonov AA, Cashen TA, Wang K, Kelcz F, Johnson KM, Korosec FR, Ersoz A, Holmes JH. Comparison of data- driven and general temporal constraints on compressed sensing for breast DCE MRI. Magn Reson Med. 2021 Jun;85(6):3071-3084. doi: 10.1002/mrm.28628. Epub 2020 Dec 11. PMID: 33306217.

Knobloch G, Nagle S, Colgan T, Schubert T, Johnson KM, Bannas P, Li G, Hinshaw L, Holmes J, Reeder SB. Feasibility and optimization of ultra-short echo time MRI for improved imaging of IVC-filters at 3.0 T. Abdom Radiol (NY). 2021 Jan;46(1):362-372. doi: 10.1007/s00261-020-02548-w. PMID: 32535691; PMCID: PMC8167878.

Zhang Y, Peña-Nogales Ó, Holmes JH, Hernando D. Motion-robust and blood- suppressed M1-optimized diffusion MR imaging of the liver. Magn Reson Med. 2019 Jul;82(1):302-311. doi: 10.1002/mrm.27735. Epub 2019 Mar 12. PMID: 30859628.

Peña-Nogales Ó, Zhang Y, Wang X, de Luis-Garcia R, Aja-Fernández S, Holmes JH, Hernando D. Optimized Diffusion-Weighting Gradient Waveform Design (ODGD) formulation for motion compensation and concomitant gradient nulling. Magn Reson Med. 2019 Feb;81(2):989-1003. doi: 10.1002/mrm.27462. Epub 2018 Nov 5. PMID: 30394568; PMCID: PMC6289642.

Zhang Y, Holmes J, Rabanillo I, Guidon A, Wells S, Hernando D. Quantitative diffusion MRI using reduced field-of-view and multi-shot acquisition techniques: Validation in phantoms and prostate imaging. Magn Reson Imaging. 2018 Sep;51:173-181. doi: 10.1016/j.mri.2018.04.006. Epub 2018 Apr 17. PMID: 29678540; PMCID: PMC6015549.